Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm44484-201ENSMUST00000199873 138 ntBASIC17.57■□□□□ 0.4
CiitaP79621 Gm44466-201ENSMUST00000200264 138 ntBASIC17.57■□□□□ 0.4
CiitaP79621 Gm44359-201ENSMUST00000200671 138 ntBASIC17.57■□□□□ 0.4
CiitaP79621 Gm6296-201ENSMUST00000222599 943 ntBASIC17.57■□□□□ 0.4
CiitaP79621 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CiitaP79621 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CiitaP79621 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CiitaP79621 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CiitaP79621 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
CiitaP79621 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CiitaP79621 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CiitaP79621 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CiitaP79621 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.57■□□□□ 0.4
CiitaP79621 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CiitaP79621 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.56■□□□□ 0.4
CiitaP79621 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.56■□□□□ 0.4
CiitaP79621 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Gm25406-201ENSMUST00000157599 105 ntBASIC17.56■□□□□ 0.4
CiitaP79621 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.56■□□□□ 0.4
CiitaP79621 Rps4l-201ENSMUST00000071745 943 ntBASIC17.56■□□□□ 0.4
CiitaP79621 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CiitaP79621 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CiitaP79621 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CiitaP79621 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CiitaP79621 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.55■□□□□ 0.4
CiitaP79621 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.55■□□□□ 0.4
CiitaP79621 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.55■□□□□ 0.4
CiitaP79621 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CiitaP79621 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.55■□□□□ 0.4
CiitaP79621 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CiitaP79621 Gm7506-201ENSMUST00000207758 815 ntBASIC17.55■□□□□ 0.4
CiitaP79621 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.55■□□□□ 0.4
CiitaP79621 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CiitaP79621 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.55■□□□□ 0.4
CiitaP79621 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CiitaP79621 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CiitaP79621 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CiitaP79621 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CiitaP79621 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CiitaP79621 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CiitaP79621 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CiitaP79621 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CiitaP79621 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.54■□□□□ 0.4
CiitaP79621 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CiitaP79621 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.54■□□□□ 0.4
CiitaP79621 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CiitaP79621 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CiitaP79621 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CiitaP79621 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CiitaP79621 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CiitaP79621 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CiitaP79621 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CiitaP79621 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CiitaP79621 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CiitaP79621 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CiitaP79621 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.53■□□□□ 0.4
CiitaP79621 Mzt1-203ENSMUST00000227948 952 ntBASIC17.53■□□□□ 0.4
CiitaP79621 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms