Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm44450-201ENSMUST00000199528 114 ntBASIC13.53□□□□□ -0.24
Pdlim4P70271 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Gm18421-201ENSMUST00000204122 625 ntBASIC13.53□□□□□ -0.24
Pdlim4P70271 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.53□□□□□ -0.24
Pdlim4P70271 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.53□□□□□ -0.24
Pdlim4P70271 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pdlim4P70271 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pdlim4P70271 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim4P70271 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim4P70271 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim4P70271 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim4P70271 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pdlim4P70271 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim4P70271 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim4P70271 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim4P70271 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.52□□□□□ -0.24
Pdlim4P70271 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim4P70271 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim4P70271 Gm6623-201ENSMUST00000173570 544 ntBASIC13.52□□□□□ -0.25
Pdlim4P70271 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim4P70271 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.52□□□□□ -0.25
Pdlim4P70271 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.52□□□□□ -0.25
Pdlim4P70271 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim4P70271 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim4P70271 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pdlim4P70271 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim4P70271 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim4P70271 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim4P70271 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pdlim4P70271 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim4P70271 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim4P70271 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim4P70271 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pdlim4P70271 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pdlim4P70271 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.51□□□□□ -0.25
Pdlim4P70271 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.51□□□□□ -0.25
Pdlim4P70271 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Pdlim4P70271 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.51□□□□□ -0.25
Pdlim4P70271 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.51□□□□□ -0.25
Pdlim4P70271 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pdlim4P70271 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Pdlim4P70271 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.51□□□□□ -0.25
Pdlim4P70271 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.51□□□□□ -0.25
Pdlim4P70271 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Pdlim4P70271 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.51□□□□□ -0.25
Pdlim4P70271 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim4P70271 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim4P70271 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim4P70271 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Pdlim4P70271 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.5□□□□□ -0.25
Pdlim4P70271 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms