Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Lsm3P62311 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Lsm3P62311 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Gm45417-201ENSMUST00000209533 758 ntBASIC14.91□□□□□ -0.02
Lsm3P62311 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.91□□□□□ -0.02
Lsm3P62311 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Lsm3P62311 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Lsm3P62311 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.9□□□□□ -0.02
Lsm3P62311 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
Lsm3P62311 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.9□□□□□ -0.02
Lsm3P62311 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Lsm3P62311 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Lsm3P62311 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.9□□□□□ -0.02
Lsm3P62311 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm3P62311 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Lsm3P62311 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Lsm3P62311 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Lsm3P62311 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.89□□□□□ -0.03
Lsm3P62311 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Lsm3P62311 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Lsm3P62311 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Lsm3P62311 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Lsm3P62311 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Lsm3P62311 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Lsm3P62311 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm3P62311 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Lsm3P62311 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.88□□□□□ -0.03
Lsm3P62311 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.88□□□□□ -0.03
Lsm3P62311 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.88□□□□□ -0.03
Lsm3P62311 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm3P62311 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.87□□□□□ -0.03
Lsm3P62311 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm3P62311 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm3P62311 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Lsm3P62311 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Lsm3P62311 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm3P62311 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Lsm3P62311 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm3P62311 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm3P62311 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm3P62311 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm3P62311 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Lsm3P62311 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms