Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nub1P54729 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.49■□□□□ 0.39
Nub1P54729 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nub1P54729 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nub1P54729 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nub1P54729 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nub1P54729 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nub1P54729 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nub1P54729 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nub1P54729 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nub1P54729 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nub1P54729 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nub1P54729 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nub1P54729 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nub1P54729 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Nub1P54729 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nub1P54729 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nub1P54729 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nub1P54729 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nub1P54729 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.48■□□□□ 0.39
Nub1P54729 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.48■□□□□ 0.39
Nub1P54729 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nub1P54729 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nub1P54729 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.48■□□□□ 0.39
Nub1P54729 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.48■□□□□ 0.39
Nub1P54729 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nub1P54729 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nub1P54729 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nub1P54729 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nub1P54729 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nub1P54729 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nub1P54729 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nub1P54729 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Nub1P54729 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nub1P54729 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Nub1P54729 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nub1P54729 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nub1P54729 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nub1P54729 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nub1P54729 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nub1P54729 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nub1P54729 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nub1P54729 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nub1P54729 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.46■□□□□ 0.39
Nub1P54729 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Nub1P54729 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.46■□□□□ 0.39
Nub1P54729 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nub1P54729 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nub1P54729 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nub1P54729 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nub1P54729 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nub1P54729 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nub1P54729 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nub1P54729 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nub1P54729 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nub1P54729 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nub1P54729 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nub1P54729 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nub1P54729 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nub1P54729 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nub1P54729 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nub1P54729 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nub1P54729 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nub1P54729 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nub1P54729 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nub1P54729 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Nub1P54729 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Nub1P54729 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nub1P54729 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.45■□□□□ 0.38
Nub1P54729 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nub1P54729 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nub1P54729 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nub1P54729 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.44■□□□□ 0.38
Nub1P54729 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.44■□□□□ 0.38
Nub1P54729 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Nub1P54729 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.44■□□□□ 0.38
Nub1P54729 Gm36967-201ENSMUST00000193814 266 ntBASIC17.44■□□□□ 0.38
Nub1P54729 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms