Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.09■□□□□ 0.17
Pdx1P52946 Gm15794-201ENSMUST00000120182 631 ntBASIC16.09■□□□□ 0.17
Pdx1P52946 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Pdx1P52946 Gm33142-201ENSMUST00000193913 867 ntBASIC16.09■□□□□ 0.17
Pdx1P52946 Gm44430-201ENSMUST00000203376 995 ntBASIC16.09■□□□□ 0.17
Pdx1P52946 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Pdx1P52946 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pdx1P52946 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pdx1P52946 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.09■□□□□ 0.17
Pdx1P52946 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Pdx1P52946 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pdx1P52946 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdx1P52946 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Pdx1P52946 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.08■□□□□ 0.17
Pdx1P52946 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pdx1P52946 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Pdx1P52946 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdx1P52946 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdx1P52946 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdx1P52946 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pdx1P52946 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdx1P52946 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdx1P52946 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Pdx1P52946 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Pdx1P52946 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.08■□□□□ 0.16
Pdx1P52946 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdx1P52946 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.08■□□□□ 0.16
Pdx1P52946 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdx1P52946 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdx1P52946 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdx1P52946 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pdx1P52946 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdx1P52946 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdx1P52946 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdx1P52946 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pdx1P52946 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.08■□□□□ 0.16
Pdx1P52946 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pdx1P52946 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 Gm7284-201ENSMUST00000131667 944 ntBASIC16.07■□□□□ 0.16
Pdx1P52946 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.07■□□□□ 0.16
Pdx1P52946 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.07■□□□□ 0.16
Pdx1P52946 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pdx1P52946 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.07■□□□□ 0.16
Pdx1P52946 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pdx1P52946 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.07■□□□□ 0.16
Pdx1P52946 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pdx1P52946 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Olfr129-201ENSMUST00000122318 993 ntBASIC16.06■□□□□ 0.16
Pdx1P52946 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Gm27704-201ENSMUST00000185094 107 ntBASIC16.06■□□□□ 0.16
Pdx1P52946 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdx1P52946 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pdx1P52946 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdx1P52946 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.05■□□□□ 0.16
Pdx1P52946 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pdx1P52946 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pdx1P52946 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdx1P52946 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdx1P52946 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.05■□□□□ 0.16
Pdx1P52946 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.05■□□□□ 0.16
Pdx1P52946 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms