Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LmnaP48678 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LmnaP48678 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LmnaP48678 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LmnaP48678 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LmnaP48678 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LmnaP48678 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.81■□□□□ 0.28
LmnaP48678 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.81■□□□□ 0.28
LmnaP48678 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LmnaP48678 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.81■□□□□ 0.28
LmnaP48678 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LmnaP48678 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.81■□□□□ 0.28
LmnaP48678 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LmnaP48678 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LmnaP48678 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LmnaP48678 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
LmnaP48678 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.8■□□□□ 0.28
LmnaP48678 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LmnaP48678 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LmnaP48678 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LmnaP48678 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LmnaP48678 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.8■□□□□ 0.28
LmnaP48678 Gm42790-201ENSMUST00000201268 969 ntBASIC16.8■□□□□ 0.28
LmnaP48678 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LmnaP48678 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.8■□□□□ 0.28
LmnaP48678 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Rps4l-201ENSMUST00000071745 943 ntBASIC16.8■□□□□ 0.28
LmnaP48678 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.8■□□□□ 0.28
LmnaP48678 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.8■□□□□ 0.28
LmnaP48678 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.8■□□□□ 0.28
LmnaP48678 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LmnaP48678 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.8■□□□□ 0.28
LmnaP48678 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LmnaP48678 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.79■□□□□ 0.28
LmnaP48678 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.79■□□□□ 0.28
LmnaP48678 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LmnaP48678 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.79■□□□□ 0.28
LmnaP48678 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LmnaP48678 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.79■□□□□ 0.28
LmnaP48678 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LmnaP48678 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LmnaP48678 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.78■□□□□ 0.28
LmnaP48678 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LmnaP48678 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LmnaP48678 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms