Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GdnfP48540 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
GdnfP48540 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GdnfP48540 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.26□□□□□ -0.13
GdnfP48540 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
GdnfP48540 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.26□□□□□ -0.13
GdnfP48540 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.26□□□□□ -0.13
GdnfP48540 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Gm3375-201ENSMUST00000203929 796 ntBASIC14.26□□□□□ -0.13
GdnfP48540 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
GdnfP48540 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.26□□□□□ -0.13
GdnfP48540 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GdnfP48540 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GdnfP48540 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GdnfP48540 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GdnfP48540 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GdnfP48540 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GdnfP48540 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GdnfP48540 Gm21814-202ENSMUST00000203277 873 ntBASIC14.25□□□□□ -0.13
GdnfP48540 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GdnfP48540 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.25□□□□□ -0.13
GdnfP48540 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GdnfP48540 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GdnfP48540 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.25□□□□□ -0.13
GdnfP48540 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GdnfP48540 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GdnfP48540 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GdnfP48540 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GdnfP48540 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
GdnfP48540 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GdnfP48540 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.24□□□□□ -0.13
GdnfP48540 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.24□□□□□ -0.13
GdnfP48540 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Gm10252-201ENSMUST00000209541 832 ntBASIC14.24□□□□□ -0.13
GdnfP48540 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Prob1-201ENSMUST00000097619 3021 ntBASIC14.24□□□□□ -0.13
GdnfP48540 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.24□□□□□ -0.13
GdnfP48540 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GdnfP48540 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
GdnfP48540 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GdnfP48540 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GdnfP48540 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GdnfP48540 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GdnfP48540 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GdnfP48540 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GdnfP48540 Gm7638-201ENSMUST00000121348 967 ntBASIC14.23□□□□□ -0.13
GdnfP48540 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.23□□□□□ -0.13
GdnfP48540 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GdnfP48540 Gm37055-201ENSMUST00000191866 133 ntBASIC14.23□□□□□ -0.13
GdnfP48540 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.23□□□□□ -0.13
GdnfP48540 Odf3b-204ENSMUST00000227834 930 ntBASIC14.23□□□□□ -0.13
GdnfP48540 Gm5417-201ENSMUST00000079706 384 ntBASIC14.23□□□□□ -0.13
GdnfP48540 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GdnfP48540 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GdnfP48540 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.23□□□□□ -0.13
GdnfP48540 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GdnfP48540 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GdnfP48540 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms