Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nedd4P46935 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.47■□□□□ 0.71
Nedd4P46935 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.47■□□□□ 0.71
Nedd4P46935 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Gm8825-201ENSMUST00000182565 998 ntBASIC19.47■□□□□ 0.71
Nedd4P46935 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.47■□□□□ 0.71
Nedd4P46935 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.47■□□□□ 0.71
Nedd4P46935 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nedd4P46935 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Nedd4P46935 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.47■□□□□ 0.71
Nedd4P46935 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.47■□□□□ 0.71
Nedd4P46935 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.47■□□□□ 0.71
Nedd4P46935 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Nedd4P46935 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.47■□□□□ 0.71
Nedd4P46935 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd4P46935 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Nedd4P46935 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.46■□□□□ 0.71
Nedd4P46935 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd4P46935 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd4P46935 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd4P46935 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nedd4P46935 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd4P46935 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nedd4P46935 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd4P46935 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd4P46935 Gm13365-201ENSMUST00000121188 973 ntBASIC19.46■□□□□ 0.71
Nedd4P46935 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.46■□□□□ 0.71
Nedd4P46935 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd4P46935 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.46■□□□□ 0.71
Nedd4P46935 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd4P46935 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd4P46935 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Nedd4P46935 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.46■□□□□ 0.71
Nedd4P46935 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd4P46935 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.46■□□□□ 0.71
Nedd4P46935 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd4P46935 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.46■□□□□ 0.71
Nedd4P46935 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.46■□□□□ 0.71
Nedd4P46935 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd4P46935 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd4P46935 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd4P46935 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd4P46935 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd4P46935 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd4P46935 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.45■□□□□ 0.7
Nedd4P46935 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.45■□□□□ 0.7
Nedd4P46935 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.45■□□□□ 0.7
Nedd4P46935 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd4P46935 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd4P46935 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd4P46935 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd4P46935 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd4P46935 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.45■□□□□ 0.7
Nedd4P46935 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd4P46935 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Nedd4P46935 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nedd4P46935 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.45■□□□□ 0.7
Nedd4P46935 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd4P46935 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd4P46935 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd4P46935 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nedd4P46935 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nedd4P46935 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nedd4P46935 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.44■□□□□ 0.7
Nedd4P46935 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.44■□□□□ 0.7
Nedd4P46935 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.44■□□□□ 0.7
Nedd4P46935 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd4P46935 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms