Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdx2P43241 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.39■□□□□ 0.05
Cdx2P43241 Mir3113-201ENSMUST00000175478 76 ntBASIC15.39■□□□□ 0.05
Cdx2P43241 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.39■□□□□ 0.05
Cdx2P43241 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.39■□□□□ 0.05
Cdx2P43241 Gm18622-201ENSMUST00000219361 595 ntBASIC15.39■□□□□ 0.05
Cdx2P43241 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdx2P43241 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cdx2P43241 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdx2P43241 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdx2P43241 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdx2P43241 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdx2P43241 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.38■□□□□ 0.05
Cdx2P43241 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdx2P43241 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cdx2P43241 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdx2P43241 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdx2P43241 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.38■□□□□ 0.05
Cdx2P43241 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cdx2P43241 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.38■□□□□ 0.05
Cdx2P43241 Gm26308-201ENSMUST00000157768 69 ntBASIC15.38■□□□□ 0.05
Cdx2P43241 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.38■□□□□ 0.05
Cdx2P43241 Mir6404-201ENSMUST00000183699 94 ntBASIC15.38■□□□□ 0.05
Cdx2P43241 Gm27646-201ENSMUST00000183989 110 ntBASIC15.38■□□□□ 0.05
Cdx2P43241 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cdx2P43241 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdx2P43241 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdx2P43241 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdx2P43241 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdx2P43241 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdx2P43241 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdx2P43241 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.37■□□□□ 0.05
Cdx2P43241 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cdx2P43241 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Cdx2P43241 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.37■□□□□ 0.05
Cdx2P43241 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.37■□□□□ 0.05
Cdx2P43241 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.37■□□□□ 0.05
Cdx2P43241 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.37■□□□□ 0.05
Cdx2P43241 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.37■□□□□ 0.05
Cdx2P43241 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.37■□□□□ 0.05
Cdx2P43241 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
Cdx2P43241 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Cdx2P43241 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdx2P43241 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cdx2P43241 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cdx2P43241 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cdx2P43241 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cdx2P43241 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.36■□□□□ 0.05
Cdx2P43241 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.36■□□□□ 0.05
Cdx2P43241 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.36■□□□□ 0.05
Cdx2P43241 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.36■□□□□ 0.05
Cdx2P43241 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Cdx2P43241 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.36■□□□□ 0.05
Cdx2P43241 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.36■□□□□ 0.05
Cdx2P43241 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.36■□□□□ 0.05
Cdx2P43241 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdx2P43241 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.35■□□□□ 0.05
Cdx2P43241 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms