Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cxcl12P40224 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cxcl12P40224 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cxcl12P40224 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cxcl12P40224 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cxcl12P40224 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.71■□□□□ 0.27
Cxcl12P40224 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.71■□□□□ 0.27
Cxcl12P40224 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.71■□□□□ 0.27
Cxcl12P40224 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Cxcl12P40224 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cxcl12P40224 Gm5312-201ENSMUST00000203728 547 ntBASIC16.71■□□□□ 0.27
Cxcl12P40224 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cxcl12P40224 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.71■□□□□ 0.27
Cxcl12P40224 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cxcl12P40224 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cxcl12P40224 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cxcl12P40224 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.71■□□□□ 0.27
Cxcl12P40224 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cxcl12P40224 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cxcl12P40224 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cxcl12P40224 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cxcl12P40224 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cxcl12P40224 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cxcl12P40224 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cxcl12P40224 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Cxcl12P40224 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cxcl12P40224 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cxcl12P40224 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cxcl12P40224 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Cxcl12P40224 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cxcl12P40224 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cxcl12P40224 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.7■□□□□ 0.26
Cxcl12P40224 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cxcl12P40224 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cxcl12P40224 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cxcl12P40224 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cxcl12P40224 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cxcl12P40224 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cxcl12P40224 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cxcl12P40224 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
Cxcl12P40224 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Cxcl12P40224 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.69■□□□□ 0.26
Cxcl12P40224 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cxcl12P40224 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cxcl12P40224 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cxcl12P40224 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl12P40224 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.68■□□□□ 0.26
Cxcl12P40224 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl12P40224 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl12P40224 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl12P40224 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl12P40224 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cxcl12P40224 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl12P40224 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl12P40224 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl12P40224 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.68■□□□□ 0.26
Cxcl12P40224 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.68■□□□□ 0.26
Cxcl12P40224 Mir6404-201ENSMUST00000183699 94 ntBASIC16.68■□□□□ 0.26
Cxcl12P40224 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cxcl12P40224 Gm7787-201ENSMUST00000216858 688 ntBASIC16.68■□□□□ 0.26
Cxcl12P40224 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cxcl12P40224 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl12P40224 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl12P40224 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl12P40224 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cxcl12P40224 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl12P40224 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl12P40224 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cxcl12P40224 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cxcl12P40224 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cxcl12P40224 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Cxcl12P40224 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.67■□□□□ 0.26
Cxcl12P40224 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.67■□□□□ 0.26
Cxcl12P40224 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms