Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LdlrP35951 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LdlrP35951 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
LdlrP35951 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LdlrP35951 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LdlrP35951 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
LdlrP35951 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LdlrP35951 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LdlrP35951 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LdlrP35951 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LdlrP35951 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.17■□□□□ 0.18
LdlrP35951 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.17■□□□□ 0.18
LdlrP35951 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LdlrP35951 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LdlrP35951 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LdlrP35951 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LdlrP35951 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LdlrP35951 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LdlrP35951 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LdlrP35951 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LdlrP35951 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
LdlrP35951 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.17■□□□□ 0.18
LdlrP35951 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LdlrP35951 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.17■□□□□ 0.18
LdlrP35951 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LdlrP35951 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LdlrP35951 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.16■□□□□ 0.18
LdlrP35951 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
LdlrP35951 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LdlrP35951 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LdlrP35951 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Gm9103-201ENSMUST00000119371 405 ntBASIC16.16■□□□□ 0.18
LdlrP35951 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LdlrP35951 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LdlrP35951 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.16■□□□□ 0.18
LdlrP35951 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LdlrP35951 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LdlrP35951 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LdlrP35951 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LdlrP35951 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.15■□□□□ 0.18
LdlrP35951 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LdlrP35951 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LdlrP35951 Ank2-226ENSMUST00000189368 339 ntBASIC16.15■□□□□ 0.18
LdlrP35951 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.15■□□□□ 0.18
LdlrP35951 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LdlrP35951 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LdlrP35951 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LdlrP35951 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
LdlrP35951 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LdlrP35951 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LdlrP35951 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LdlrP35951 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
LdlrP35951 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.15■□□□□ 0.18
LdlrP35951 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
LdlrP35951 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LdlrP35951 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LdlrP35951 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LdlrP35951 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LdlrP35951 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LdlrP35951 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LdlrP35951 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LdlrP35951 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LdlrP35951 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms