Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cd28P31041 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.38□□□□□ -0.11
Cd28P31041 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.38□□□□□ -0.11
Cd28P31041 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.38□□□□□ -0.11
Cd28P31041 Gm12933-201ENSMUST00000120203 872 ntBASIC14.38□□□□□ -0.11
Cd28P31041 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.38□□□□□ -0.11
Cd28P31041 Gm27405-201ENSMUST00000184201 112 ntBASIC14.38□□□□□ -0.11
Cd28P31041 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cd28P31041 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.38□□□□□ -0.11
Cd28P31041 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Cd28P31041 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Cd28P31041 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Cd28P31041 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cd28P31041 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cd28P31041 Gm27275-201ENSMUST00000184318 272 ntBASIC14.37□□□□□ -0.11
Cd28P31041 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.37□□□□□ -0.11
Cd28P31041 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cd28P31041 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cd28P31041 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd28P31041 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.36□□□□□ -0.11
Cd28P31041 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd28P31041 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Cd28P31041 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd28P31041 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd28P31041 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd28P31041 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd28P31041 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd28P31041 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cd28P31041 Gm18958-201ENSMUST00000174258 762 ntBASIC14.36□□□□□ -0.11
Cd28P31041 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.36□□□□□ -0.11
Cd28P31041 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd28P31041 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Cd28P31041 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd28P31041 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd28P31041 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd28P31041 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd28P31041 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.36□□□□□ -0.11
Cd28P31041 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd28P31041 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd28P31041 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cd28P31041 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd28P31041 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Cd28P31041 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd28P31041 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd28P31041 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.35□□□□□ -0.11
Cd28P31041 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cd28P31041 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd28P31041 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd28P31041 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd28P31041 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.35□□□□□ -0.11
Cd28P31041 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd28P31041 Gm9731-201ENSMUST00000209480 747 ntBASIC14.35□□□□□ -0.11
Cd28P31041 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd28P31041 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd28P31041 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms