Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nfkb1P25799 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.66■□□□□ 0.26
Nfkb1P25799 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nfkb1P25799 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nfkb1P25799 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nfkb1P25799 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.66■□□□□ 0.26
Nfkb1P25799 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nfkb1P25799 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Nfkb1P25799 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Nfkb1P25799 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.66■□□□□ 0.26
Nfkb1P25799 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Nfkb1P25799 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nfkb1P25799 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nfkb1P25799 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nfkb1P25799 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Nfkb1P25799 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Nfkb1P25799 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nfkb1P25799 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nfkb1P25799 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.66■□□□□ 0.26
Nfkb1P25799 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nfkb1P25799 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Nfkb1P25799 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nfkb1P25799 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.65■□□□□ 0.26
Nfkb1P25799 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.65■□□□□ 0.26
Nfkb1P25799 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.65■□□□□ 0.26
Nfkb1P25799 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nfkb1P25799 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nfkb1P25799 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.65■□□□□ 0.26
Nfkb1P25799 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Nfkb1P25799 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nfkb1P25799 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Nfkb1P25799 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nfkb1P25799 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nfkb1P25799 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nfkb1P25799 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nfkb1P25799 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nfkb1P25799 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nfkb1P25799 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Nfkb1P25799 Gm36967-201ENSMUST00000193814 266 ntBASIC16.64■□□□□ 0.25
Nfkb1P25799 Gm44357-201ENSMUST00000195897 142 ntBASIC16.64■□□□□ 0.25
Nfkb1P25799 Gm19658-201ENSMUST00000196231 138 ntBASIC16.64■□□□□ 0.25
Nfkb1P25799 Gm44367-201ENSMUST00000196836 138 ntBASIC16.64■□□□□ 0.25
Nfkb1P25799 Gm44350-201ENSMUST00000197197 138 ntBASIC16.64■□□□□ 0.25
Nfkb1P25799 Gm44390-201ENSMUST00000197533 144 ntBASIC16.64■□□□□ 0.25
Nfkb1P25799 Gm44313-201ENSMUST00000198018 138 ntBASIC16.64■□□□□ 0.25
Nfkb1P25799 Gm44486-201ENSMUST00000198508 138 ntBASIC16.64■□□□□ 0.25
Nfkb1P25799 Gm44314-201ENSMUST00000199263 138 ntBASIC16.64■□□□□ 0.25
Nfkb1P25799 Gm44394-201ENSMUST00000199558 138 ntBASIC16.64■□□□□ 0.25
Nfkb1P25799 Gm44484-201ENSMUST00000199873 138 ntBASIC16.64■□□□□ 0.25
Nfkb1P25799 Gm44466-201ENSMUST00000200264 138 ntBASIC16.64■□□□□ 0.25
Nfkb1P25799 Gm44359-201ENSMUST00000200671 138 ntBASIC16.64■□□□□ 0.25
Nfkb1P25799 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nfkb1P25799 Rps4l-201ENSMUST00000071745 943 ntBASIC16.64■□□□□ 0.25
Nfkb1P25799 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nfkb1P25799 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nfkb1P25799 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nfkb1P25799 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nfkb1P25799 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nfkb1P25799 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nfkb1P25799 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nfkb1P25799 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nfkb1P25799 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nfkb1P25799 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nfkb1P25799 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nfkb1P25799 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Nfkb1P25799 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Gm25745-201ENSMUST00000174945 133 ntBASIC16.63■□□□□ 0.25
Nfkb1P25799 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nfkb1P25799 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nfkb1P25799 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nfkb1P25799 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms