Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Msh3P13705 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh3P13705 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh3P13705 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Msh3P13705 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.88■□□□□ 0.45
Msh3P13705 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh3P13705 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh3P13705 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh3P13705 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh3P13705 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh3P13705 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh3P13705 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Msh3P13705 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh3P13705 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Msh3P13705 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh3P13705 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Msh3P13705 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh3P13705 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.87■□□□□ 0.45
Msh3P13705 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh3P13705 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh3P13705 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh3P13705 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.87■□□□□ 0.45
Msh3P13705 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh3P13705 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Msh3P13705 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Msh3P13705 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh3P13705 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Msh3P13705 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.87■□□□□ 0.45
Msh3P13705 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh3P13705 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh3P13705 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh3P13705 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh3P13705 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Msh3P13705 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh3P13705 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.86■□□□□ 0.45
Msh3P13705 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Gm13312-201ENSMUST00000119631 718 ntBASIC17.86■□□□□ 0.45
Msh3P13705 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.86■□□□□ 0.45
Msh3P13705 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Msh3P13705 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Msh3P13705 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Msh3P13705 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.86■□□□□ 0.45
Msh3P13705 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Msh3P13705 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Msh3P13705 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.86■□□□□ 0.45
Msh3P13705 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Msh3P13705 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Msh3P13705 Olfr129-201ENSMUST00000122318 993 ntBASIC17.85■□□□□ 0.45
Msh3P13705 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.85■□□□□ 0.45
Msh3P13705 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Msh3P13705 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.85■□□□□ 0.45
Msh3P13705 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.85■□□□□ 0.45
Msh3P13705 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Msh3P13705 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh3P13705 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh3P13705 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh3P13705 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.84■□□□□ 0.45
Msh3P13705 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh3P13705 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh3P13705 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh3P13705 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh3P13705 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh3P13705 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh3P13705 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Msh3P13705 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Msh3P13705 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Msh3P13705 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Msh3P13705 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms