Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.46□□□□□ -0.09
P06344 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.46□□□□□ -0.09
P06344 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P06344 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
P06344 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
P06344 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P06344 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
P06344 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
P06344 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P06344 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
P06344 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
P06344 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
P06344 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.46□□□□□ -0.1
P06344 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
P06344 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
P06344 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
P06344 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.45□□□□□ -0.1
P06344 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Gm27741-201ENSMUST00000185060 237 ntBASIC14.45□□□□□ -0.1
P06344 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
P06344 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
P06344 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P06344 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06344 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06344 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06344 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06344 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.44□□□□□ -0.1
P06344 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06344 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06344 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06344 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
P06344 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
P06344 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.44□□□□□ -0.1
P06344 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06344 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
P06344 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.44□□□□□ -0.1
P06344 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06344 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06344 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06344 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
P06344 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
P06344 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.43□□□□□ -0.1
P06344 Gm13312-201ENSMUST00000119631 718 ntBASIC14.43□□□□□ -0.1
P06344 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
P06344 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.43□□□□□ -0.1
P06344 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
P06344 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.43□□□□□ -0.1
P06344 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.43□□□□□ -0.1
P06344 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.43□□□□□ -0.1
P06344 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
P06344 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06344 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
P06344 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06344 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P06344 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P06344 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06344 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
P06344 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.42□□□□□ -0.1
P06344 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P06344 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06344 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.42□□□□□ -0.1
P06344 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06344 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06344 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P06344 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms