Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
PdgfrbP05622 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.43■□□□□ 0.22
PdgfrbP05622 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.43■□□□□ 0.22
PdgfrbP05622 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.43■□□□□ 0.22
PdgfrbP05622 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.43■□□□□ 0.22
PdgfrbP05622 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PdgfrbP05622 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PdgfrbP05622 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.42■□□□□ 0.22
PdgfrbP05622 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PdgfrbP05622 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PdgfrbP05622 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PdgfrbP05622 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PdgfrbP05622 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.41■□□□□ 0.22
PdgfrbP05622 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.41■□□□□ 0.22
PdgfrbP05622 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PdgfrbP05622 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PdgfrbP05622 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.41■□□□□ 0.22
PdgfrbP05622 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PdgfrbP05622 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
PdgfrbP05622 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PdgfrbP05622 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.4■□□□□ 0.22
PdgfrbP05622 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PdgfrbP05622 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.4■□□□□ 0.22
PdgfrbP05622 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.4■□□□□ 0.22
PdgfrbP05622 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PdgfrbP05622 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 AA414768-201ENSMUST00000121924 1257 ntBASIC16.4■□□□□ 0.22
PdgfrbP05622 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.4■□□□□ 0.22
PdgfrbP05622 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PdgfrbP05622 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms