Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.31□□□□□ -0.12
P04224 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.31□□□□□ -0.12
P04224 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.31□□□□□ -0.12
P04224 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.31□□□□□ -0.12
P04224 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
P04224 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
P04224 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
P04224 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.3□□□□□ -0.12
P04224 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
P04224 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
P04224 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.3□□□□□ -0.12
P04224 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.3□□□□□ -0.12
P04224 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.3□□□□□ -0.12
P04224 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.3□□□□□ -0.12
P04224 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
P04224 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
P04224 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.3□□□□□ -0.12
P04224 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
P04224 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04224 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
P04224 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
P04224 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
P04224 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.29□□□□□ -0.12
P04224 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.29□□□□□ -0.12
P04224 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.29□□□□□ -0.12
P04224 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
P04224 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.29□□□□□ -0.12
P04224 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
P04224 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04224 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
P04224 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.28□□□□□ -0.12
P04224 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
P04224 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
P04224 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
P04224 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Gm12933-201ENSMUST00000120203 872 ntBASIC14.28□□□□□ -0.12
P04224 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.28□□□□□ -0.12
P04224 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.28□□□□□ -0.12
P04224 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms