Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cops6O88545 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cops6O88545 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cops6O88545 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cops6O88545 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops6O88545 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops6O88545 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Cops6O88545 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops6O88545 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cops6O88545 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops6O88545 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops6O88545 Gm8000-201ENSMUST00000188378 592 ntBASIC19.79■□□□□ 0.76
Cops6O88545 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops6O88545 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.79■□□□□ 0.76
Cops6O88545 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.79■□□□□ 0.76
Cops6O88545 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops6O88545 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cops6O88545 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops6O88545 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops6O88545 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cops6O88545 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops6O88545 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops6O88545 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops6O88545 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cops6O88545 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cops6O88545 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.78■□□□□ 0.76
Cops6O88545 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops6O88545 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops6O88545 Gm11779-201ENSMUST00000118541 368 ntBASIC19.78■□□□□ 0.76
Cops6O88545 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.78■□□□□ 0.76
Cops6O88545 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cops6O88545 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cops6O88545 Gm37935-201ENSMUST00000192012 982 ntBASIC19.78■□□□□ 0.76
Cops6O88545 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops6O88545 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cops6O88545 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops6O88545 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops6O88545 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.77■□□□□ 0.76
Cops6O88545 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops6O88545 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cops6O88545 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.77■□□□□ 0.76
Cops6O88545 Gm13036-201ENSMUST00000117799 748 ntBASIC19.77■□□□□ 0.76
Cops6O88545 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.77■□□□□ 0.76
Cops6O88545 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.77■□□□□ 0.76
Cops6O88545 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cops6O88545 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops6O88545 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops6O88545 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.77■□□□□ 0.76
Cops6O88545 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cops6O88545 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops6O88545 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cops6O88545 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cops6O88545 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Gm27628-201ENSMUST00000184911 107 ntBASIC19.76■□□□□ 0.75
Cops6O88545 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.76■□□□□ 0.75
Cops6O88545 Gm18622-201ENSMUST00000219361 595 ntBASIC19.76■□□□□ 0.75
Cops6O88545 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cops6O88545 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cops6O88545 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.76■□□□□ 0.75
Cops6O88545 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops6O88545 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cops6O88545 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cops6O88545 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.75■□□□□ 0.75
Cops6O88545 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.75■□□□□ 0.75
Cops6O88545 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cops6O88545 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops6O88545 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.74■□□□□ 0.75
Cops6O88545 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms