Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Alx3O70137 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Alx3O70137 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.77□□□□□ -0.04
Alx3O70137 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Alx3O70137 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Alx3O70137 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Alx3O70137 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Alx3O70137 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Alx3O70137 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Alx3O70137 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Alx3O70137 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Gm11539-201ENSMUST00000119837 557 ntBASIC14.77□□□□□ -0.05
Alx3O70137 Gm13474-201ENSMUST00000122466 815 ntBASIC14.77□□□□□ -0.05
Alx3O70137 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.77□□□□□ -0.05
Alx3O70137 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.77□□□□□ -0.05
Alx3O70137 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.77□□□□□ -0.05
Alx3O70137 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.77□□□□□ -0.05
Alx3O70137 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Alx3O70137 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx3O70137 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Alx3O70137 Actl10-202ENSMUST00000226583 1501 ntBASIC14.76□□□□□ -0.05
Alx3O70137 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Alx3O70137 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Alx3O70137 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Alx3O70137 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Alx3O70137 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.76□□□□□ -0.05
Alx3O70137 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx3O70137 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx3O70137 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx3O70137 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx3O70137 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
Alx3O70137 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Alx3O70137 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Alx3O70137 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx3O70137 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx3O70137 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.75□□□□□ -0.05
Alx3O70137 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Alx3O70137 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx3O70137 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Alx3O70137 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.75□□□□□ -0.05
Alx3O70137 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx3O70137 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Alx3O70137 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx3O70137 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx3O70137 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.75□□□□□ -0.05
Alx3O70137 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.75□□□□□ -0.05
Alx3O70137 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx3O70137 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx3O70137 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Alx3O70137 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx3O70137 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx3O70137 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx3O70137 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.74□□□□□ -0.05
Alx3O70137 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx3O70137 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx3O70137 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Alx3O70137 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx3O70137 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx3O70137 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx3O70137 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx3O70137 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.74□□□□□ -0.05
Alx3O70137 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.74□□□□□ -0.05
Alx3O70137 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx3O70137 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.74□□□□□ -0.05
Alx3O70137 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx3O70137 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.74□□□□□ -0.05
Alx3O70137 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Alx3O70137 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx3O70137 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx3O70137 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Alx3O70137 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx3O70137 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms