Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
DffbO54788 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.98□□□□□ -0.17
DffbO54788 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.98□□□□□ -0.17
DffbO54788 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
DffbO54788 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DffbO54788 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.97□□□□□ -0.17
DffbO54788 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DffbO54788 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DffbO54788 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DffbO54788 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DffbO54788 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
DffbO54788 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
DffbO54788 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DffbO54788 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
DffbO54788 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DffbO54788 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DffbO54788 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.97□□□□□ -0.17
DffbO54788 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.97□□□□□ -0.17
DffbO54788 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
DffbO54788 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DffbO54788 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DffbO54788 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DffbO54788 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DffbO54788 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DffbO54788 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
DffbO54788 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DffbO54788 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DffbO54788 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DffbO54788 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DffbO54788 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DffbO54788 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DffbO54788 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DffbO54788 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.96□□□□□ -0.17
DffbO54788 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DffbO54788 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.96□□□□□ -0.17
DffbO54788 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DffbO54788 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.96□□□□□ -0.17
DffbO54788 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.96□□□□□ -0.17
DffbO54788 Timm23-208ENSMUST00000226683 750 ntBASIC13.96□□□□□ -0.17
DffbO54788 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DffbO54788 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
DffbO54788 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
DffbO54788 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.96□□□□□ -0.18
DffbO54788 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
DffbO54788 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
DffbO54788 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
DffbO54788 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.96□□□□□ -0.18
DffbO54788 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
DffbO54788 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
DffbO54788 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.95□□□□□ -0.18
DffbO54788 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
DffbO54788 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.95□□□□□ -0.18
DffbO54788 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
DffbO54788 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.95□□□□□ -0.18
DffbO54788 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.95□□□□□ -0.18
DffbO54788 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.95□□□□□ -0.18
DffbO54788 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.95□□□□□ -0.18
DffbO54788 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
DffbO54788 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
DffbO54788 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
DffbO54788 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
DffbO54788 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
DffbO54788 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
DffbO54788 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
DffbO54788 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DffbO54788 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
DffbO54788 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DffbO54788 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DffbO54788 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DffbO54788 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DffbO54788 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DffbO54788 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DffbO54788 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
DffbO54788 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DffbO54788 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.94□□□□□ -0.18
DffbO54788 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DffbO54788 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DffbO54788 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
DffbO54788 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
DffbO54788 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms