Protein–RNA interactions for Protein: O35902

Dsg3, Desmoglein-3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dsg3O35902 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dsg3O35902 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Dsg3O35902 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dsg3O35902 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Dsg3O35902 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dsg3O35902 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dsg3O35902 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.32■□□□□ 0.36
Dsg3O35902 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Dsg3O35902 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.31■□□□□ 0.36
Dsg3O35902 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Gm43575-201ENSMUST00000196420 516 ntBASIC17.31■□□□□ 0.36
Dsg3O35902 Gm44430-201ENSMUST00000203376 995 ntBASIC17.31■□□□□ 0.36
Dsg3O35902 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Dsg3O35902 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Dsg3O35902 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.31■□□□□ 0.36
Dsg3O35902 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Dsg3O35902 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dsg3O35902 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Dsg3O35902 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Dsg3O35902 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Dsg3O35902 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.3■□□□□ 0.36
Dsg3O35902 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.3■□□□□ 0.36
Dsg3O35902 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.3■□□□□ 0.36
Dsg3O35902 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Dsg3O35902 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Dsg3O35902 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dsg3O35902 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dsg3O35902 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dsg3O35902 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dsg3O35902 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dsg3O35902 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Dsg3O35902 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dsg3O35902 Gm15467-201ENSMUST00000120582 445 ntBASIC17.29■□□□□ 0.36
Dsg3O35902 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Dsg3O35902 Gm25745-201ENSMUST00000174945 133 ntBASIC17.29■□□□□ 0.36
Dsg3O35902 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.29■□□□□ 0.36
Dsg3O35902 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Dsg3O35902 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.29■□□□□ 0.36
Dsg3O35902 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.29■□□□□ 0.36
Dsg3O35902 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.29■□□□□ 0.36
Dsg3O35902 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.29■□□□□ 0.36
Dsg3O35902 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dsg3O35902 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dsg3O35902 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Dsg3O35902 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Dsg3O35902 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dsg3O35902 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dsg3O35902 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dsg3O35902 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dsg3O35902 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Dsg3O35902 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dsg3O35902 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dsg3O35902 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dsg3O35902 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dsg3O35902 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Dsg3O35902 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Dsg3O35902 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Dsg3O35902 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dsg3O35902 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Dsg3O35902 Gm6736-201ENSMUST00000166583 948 ntBASIC17.28■□□□□ 0.36
Dsg3O35902 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.28■□□□□ 0.36
Dsg3O35902 Psmb5-202ENSMUST00000227257 622 ntBASIC17.28■□□□□ 0.36
Dsg3O35902 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Dsg3O35902 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Dsg3O35902 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.28■□□□□ 0.36
Dsg3O35902 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dsg3O35902 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms