Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC24.31■■□□□ 1.48
Ccdc141E9Q8Q6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ccdc141E9Q8Q6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC24.31■■□□□ 1.48
Ccdc141E9Q8Q6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Ccdc141E9Q8Q6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC24.31■■□□□ 1.48
Ccdc141E9Q8Q6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ccdc141E9Q8Q6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC24.31■■□□□ 1.48
Ccdc141E9Q8Q6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ccdc141E9Q8Q6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC24.31■■□□□ 1.48
Ccdc141E9Q8Q6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC24.31■■□□□ 1.48
Ccdc141E9Q8Q6 Nrn1-204ENSMUST00000224323 1779 ntBASIC24.31■■□□□ 1.48
Ccdc141E9Q8Q6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Ccdc141E9Q8Q6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ccdc141E9Q8Q6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC24.3■■□□□ 1.48
Ccdc141E9Q8Q6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ccdc141E9Q8Q6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Ccdc141E9Q8Q6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC24.3■■□□□ 1.48
Ccdc141E9Q8Q6 Gm43125-201ENSMUST00000201724 730 ntBASIC24.3■■□□□ 1.48
Ccdc141E9Q8Q6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ccdc141E9Q8Q6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ccdc141E9Q8Q6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ccdc141E9Q8Q6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC24.3■■□□□ 1.48
Ccdc141E9Q8Q6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Ccdc141E9Q8Q6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Ccdc141E9Q8Q6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC24.3■■□□□ 1.48
Ccdc141E9Q8Q6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC24.3■■□□□ 1.48
Ccdc141E9Q8Q6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ccdc141E9Q8Q6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc141E9Q8Q6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Ccdc141E9Q8Q6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc141E9Q8Q6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc141E9Q8Q6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc141E9Q8Q6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc141E9Q8Q6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc141E9Q8Q6 Mir7036b-201ENSMUST00000184791 63 ntBASIC24.29■■□□□ 1.48
Ccdc141E9Q8Q6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC24.29■■□□□ 1.48
Ccdc141E9Q8Q6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Ccdc141E9Q8Q6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc141E9Q8Q6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc141E9Q8Q6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc141E9Q8Q6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc141E9Q8Q6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ccdc141E9Q8Q6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Ccdc141E9Q8Q6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ccdc141E9Q8Q6 Gm25948-201ENSMUST00000175334 112 ntBASIC24.28■■□□□ 1.48
Ccdc141E9Q8Q6 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ccdc141E9Q8Q6 AC151836.1-202ENSMUST00000226259 753 ntBASIC24.28■■□□□ 1.48
Ccdc141E9Q8Q6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ccdc141E9Q8Q6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ccdc141E9Q8Q6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc141E9Q8Q6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc141E9Q8Q6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC24.27■■□□□ 1.48
Ccdc141E9Q8Q6 Gm13365-201ENSMUST00000121188 973 ntBASIC24.27■■□□□ 1.48
Ccdc141E9Q8Q6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc141E9Q8Q6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Ccdc141E9Q8Q6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC24.27■■□□□ 1.48
Ccdc141E9Q8Q6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc141E9Q8Q6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc141E9Q8Q6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc141E9Q8Q6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc141E9Q8Q6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Ccdc141E9Q8Q6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Ccdc141E9Q8Q6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ccdc141E9Q8Q6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ccdc141E9Q8Q6 Mir6990-201ENSMUST00000183724 91 ntBASIC24.26■■□□□ 1.47
Ccdc141E9Q8Q6 Thap2-203ENSMUST00000218989 527 ntBASIC24.26■■□□□ 1.47
Ccdc141E9Q8Q6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ccdc141E9Q8Q6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ccdc141E9Q8Q6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ccdc141E9Q8Q6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ccdc141E9Q8Q6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ccdc141E9Q8Q6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ccdc141E9Q8Q6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Ccdc141E9Q8Q6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ccdc141E9Q8Q6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC24.26■■□□□ 1.47
Ccdc141E9Q8Q6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
Ccdc141E9Q8Q6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Gm6257-201ENSMUST00000163864 910 ntBASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC24.25■■□□□ 1.47
Ccdc141E9Q8Q6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms