Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx8D3YU81 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx8D3YU81 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.23■□□□□ 0.35
Rfx8D3YU81 Gm17808-201ENSMUST00000200859 894 ntBASIC17.23■□□□□ 0.35
Rfx8D3YU81 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Gm45328-201ENSMUST00000210942 917 ntBASIC17.22■□□□□ 0.35
Rfx8D3YU81 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx8D3YU81 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx8D3YU81 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx8D3YU81 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx8D3YU81 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx8D3YU81 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx8D3YU81 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx8D3YU81 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx8D3YU81 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx8D3YU81 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.21■□□□□ 0.35
Rfx8D3YU81 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.21■□□□□ 0.35
Rfx8D3YU81 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Rfx8D3YU81 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx8D3YU81 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx8D3YU81 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx8D3YU81 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.21■□□□□ 0.35
Rfx8D3YU81 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx8D3YU81 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.21■□□□□ 0.35
Rfx8D3YU81 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.21■□□□□ 0.35
Rfx8D3YU81 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rfx8D3YU81 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rfx8D3YU81 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
Rfx8D3YU81 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rfx8D3YU81 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rfx8D3YU81 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx8D3YU81 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.19■□□□□ 0.34
Rfx8D3YU81 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx8D3YU81 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms