Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Gm6257-201ENSMUST00000163864 910 ntBASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Mir1895-201ENSMUST00000122615 79 ntBASIC16.62■□□□□ 0.25
Col4a6B1AVK5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Mir6956-201ENSMUST00000183598 62 ntBASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Rarb-207ENSMUST00000225921 2756 ntBASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a6B1AVK5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Gm13616-201ENSMUST00000120600 222 ntBASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Gm18489-201ENSMUST00000172565 551 ntBASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a6B1AVK5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col4a6B1AVK5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Gm44335-201ENSMUST00000196879 141 ntBASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Gm44297-201ENSMUST00000198304 141 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms