Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.96■□□□□ 0.31
Scn1aA2APX8 Gm6296-201ENSMUST00000222599 943 ntBASIC16.96■□□□□ 0.31
Scn1aA2APX8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Scn1aA2APX8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Scn1aA2APX8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.96■□□□□ 0.3
Scn1aA2APX8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Scn1aA2APX8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
Scn1aA2APX8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.96■□□□□ 0.3
Scn1aA2APX8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.96■□□□□ 0.3
Scn1aA2APX8 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.96■□□□□ 0.3
Scn1aA2APX8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.95■□□□□ 0.3
Scn1aA2APX8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.95■□□□□ 0.3
Scn1aA2APX8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Gm2651-201ENSMUST00000203560 838 ntBASIC16.95■□□□□ 0.3
Scn1aA2APX8 Gm6376-201ENSMUST00000209407 580 ntBASIC16.95■□□□□ 0.3
Scn1aA2APX8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.95■□□□□ 0.3
Scn1aA2APX8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn1aA2APX8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn1aA2APX8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Gm18733-201ENSMUST00000173950 856 ntBASIC16.93■□□□□ 0.3
Scn1aA2APX8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Scn1aA2APX8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn1aA2APX8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.92■□□□□ 0.3
Scn1aA2APX8 Gm8097-201ENSMUST00000117903 829 ntBASIC16.92■□□□□ 0.3
Scn1aA2APX8 Gm6257-201ENSMUST00000163864 910 ntBASIC16.92■□□□□ 0.3
Scn1aA2APX8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms