Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Mir6404-201ENSMUST00000183699 94 ntBASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gm25745-201ENSMUST00000174945 133 ntBASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms