Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Gm37055-201ENSMUST00000191866 133 ntBASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc194A0A140LIT1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Gm7213-201ENSMUST00000215977 950 ntBASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc194A0A140LIT1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms