Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.33□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gm15372-201ENSMUST00000120729 834 ntBASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gm44454-201ENSMUST00000198541 138 ntBASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-1A0A0B4J1H0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms