Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-4A0A075B6B4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.52□□□□□ -0.4
Trav6-4A0A075B6B4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-4A0A075B6B4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav6-4A0A075B6B4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-4A0A075B6B4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-4A0A075B6B4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Gm11950-201ENSMUST00000121615 838 ntBASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-4A0A075B6B4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Gm7977-201ENSMUST00000193787 748 ntBASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Gm17808-201ENSMUST00000200859 894 ntBASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Gm45328-201ENSMUST00000210942 917 ntBASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-4A0A075B6B4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Gm10052-201ENSMUST00000168019 960 ntBASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Gm29518-201ENSMUST00000190858 372 ntBASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Gm7729-201ENSMUST00000050143 801 ntBASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms