Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Mir1199-201ENSMUST00000117015 119 ntBASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Mir8112-201ENSMUST00000184382 131 ntBASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6n-6A0A075B6B2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6n-6A0A075B6B2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Trav6n-6A0A075B6B2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.15□□□□□ -0.47
Trav6n-6A0A075B6B2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav6n-6A0A075B6B2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Gm4974-201ENSMUST00000209974 875 ntBASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms