Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.94□□□□□ -0.34
Trav17A0A075B655 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.94□□□□□ -0.34
Trav17A0A075B655 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.94□□□□□ -0.34
Trav17A0A075B655 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav17A0A075B655 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav17A0A075B655 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.93□□□□□ -0.34
Trav17A0A075B655 Gm20049-201ENSMUST00000219950 730 ntBASIC12.93□□□□□ -0.34
Trav17A0A075B655 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav17A0A075B655 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Trav17A0A075B655 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav17A0A075B655 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav17A0A075B655 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav17A0A075B655 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav17A0A075B655 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.92□□□□□ -0.34
Trav17A0A075B655 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav17A0A075B655 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav17A0A075B655 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav17A0A075B655 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav17A0A075B655 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav17A0A075B655 Gm12085-201ENSMUST00000119263 940 ntBASIC12.92□□□□□ -0.34
Trav17A0A075B655 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav17A0A075B655 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav17A0A075B655 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms