Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Gm36967-201ENSMUST00000193814 266 ntBASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-1A0A075B5Z8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Phf7-203ENSMUST00000226565 1971 ntBASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-1A0A075B5Z8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6-1A0A075B5Z8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms