Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.6□□□□□ -1.83
NCKIPSDQ9NZQ3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 RNA5SP42-201ENST00000364278 115 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 Y_RNA.295-201ENST00000364918 102 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU6-76P-201ENST00000384060 104 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 Y_RNA.573-201ENST00000384763 105 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AL109755.1-201ENST00000401791 649 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AL136116.1-201ENST00000403591 381 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 HSPE1P26-201ENST00000405341 275 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU2-41P-201ENST00000410991 178 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 USP9YP27-201ENST00000418455 438 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AL139413.1-201ENST00000421309 217 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AL158156.1-201ENST00000422509 473 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 PPP1R11P2-201ENST00000423543 382 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 ARF4P2-201ENST00000430209 526 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 RPL23AP30-201ENST00000432419 501 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AC073063.1-201ENST00000434352 607 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 RPL9P32-201ENST00000464118 620 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 RN7SL601P-201ENST00000471221 293 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 RN7SKP60-201ENST00000516985 239 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 ERHP1-201ENST00000523006 310 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 MTND1P35-201ENST00000526739 508 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AC103843.2-201ENST00000530523 682 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AC006116.10-201ENST00000591836 581 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AC025449.1-201ENST00000603896 529 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AL035413.2-201ENST00000604801 525 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AL160281.1-201ENST00000605307 311 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AC016727.1-205ENST00000605437 569 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AC093788.1-201ENST00000609356 927 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 uc_338.12-201ENST00000616344 181 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 AL603758.1-201ENST00000618654 241 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 GABPAP-201ENST00000419271 1356 ntBASIC3.59□□□□□ -1.83
NCKIPSDQ9NZQ3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.84
NCKIPSDQ9NZQ3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.59□□□□□ -1.84
NCKIPSDQ9NZQ3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NCKIPSDQ9NZQ3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 Y_RNA.38-201ENST00000362617 102 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU5A-1-201ENST00000362698 116 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 SNORA23-201ENST00000365128 182 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 DEFB109C-201ENST00000382575 264 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 DEFB109B-201ENST00000382656 264 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 RPS4XP8-201ENST00000402039 771 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-908P-201ENST00000410160 94 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC016831.2-201ENST00000417179 352 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 MTATP6P18-201ENST00000417994 673 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC245054.1-201ENST00000420944 258 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 RPL31P12-201ENST00000422587 358 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AL158071.1-201ENST00000430315 461 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC119618.1-201ENST00000434191 222 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 RPL26P6-201ENST00000440913 438 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 RPL23AP20-201ENST00000447965 421 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AL162389.1-201ENST00000449233 177 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 MRPS31P2-201ENST00000451581 518 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 MTCO2P29-201ENST00000465212 189 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC023194.1-201ENST00000493084 308 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 PCBP2P3-201ENST00000509726 843 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 GMPSP1-201ENST00000514075 579 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 SCARNA24.1-201ENST00000516465 137 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-579P-201ENST00000516879 102 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AP003072.2-201ENST00000527756 676 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC104383.1-201ENST00000530297 370 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AL512310.1-201ENST00000548639 172 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AF038458.1-201ENST00000588406 262 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AL356055.1-201ENST00000602528 446 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC012507.3-201ENST00000603556 477 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC008945.2-201ENST00000606056 604 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AP002826.1-201ENST00000608835 315 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms