Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AC107016.2-201ENST00000547968 190 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 TRAV28-201ENST00000557548 323 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AL356432.3-201ENST00000568952 465 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AC011471.1-201ENST00000585766 187 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AL133393.1-201ENST00000603277 287 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 SNHG22-203ENST00000617833 660 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 MIR3974-201ENST00000637126 96 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 PABPC1P9-201ENST00000426076 1612 ntBASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SMC4Q9NTJ3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 ZNF833P-201ENST00000424938 1494 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AP003122.5-201ENST00000527668 3766 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AL445523.1-201ENST00000451184 1362 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 SNORA48.2-201ENST00000390926 124 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 MTCYBP36-201ENST00000404146 440 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AL354719.1-201ENST00000406535 843 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 RNU2-33P-201ENST00000410344 192 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AL451074.5-201ENST00000415894 435 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AL139132.1-201ENST00000431587 344 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AL512844.2-201ENST00000433990 593 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 Z82210.1-201ENST00000440037 231 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AC118469.1-201ENST00000442943 488 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AC020550.1-201ENST00000447385 163 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 NIPA2P5-201ENST00000452282 464 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AL135752.1-201ENST00000479477 471 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AC112204.1-201ENST00000502591 103 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AC083906.5-201ENST00000503722 328 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 Y_RNA.688-201ENST00000516565 95 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 SNORA31.26-201ENST00000517250 137 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AC106038.2-201ENST00000520706 568 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AC060788.1-201ENST00000521318 469 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 MTCO1P47-201ENST00000523889 1271 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AC007536.1-201ENST00000533382 349 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AC121247.2-201ENST00000604776 136 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AL020991.1-201ENST00000612314 373 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AC135507.2-201ENST00000612443 309 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AC009159.1-201ENST00000618386 642 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 AP003122.6-201ENST00000623831 495 ntBASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.68□□□□□ -1.82
SMC4Q9NTJ3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 GNG5P1-201ENST00000255500 204 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 RNU6-1284P-201ENST00000363701 100 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 SNORA44-201ENST00000384584 132 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 MIR181A2-201ENST00000384863 110 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 MIR512-1-201ENST00000384913 84 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 RNU6-278P-201ENST00000390945 109 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AL359634.1-202ENST00000404721 284 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC092047.1-201ENST00000424997 240 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 RPL21P40-201ENST00000428586 483 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 TIMM9P1-201ENST00000436122 256 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 BNIP3P2-201ENST00000441221 577 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 MTND2P22-201ENST00000444325 1033 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 BMI1P1-201ENST00000445879 941 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 MTATP6P26-201ENST00000445926 662 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 NANOGNBP1-201ENST00000448444 480 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC093392.2-201ENST00000450682 337 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC109486.1-201ENST00000486833 374 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC093534.1-201ENST00000504977 132 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 RNA5SP291-201ENST00000517222 105 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 MTND4LP18-201ENST00000526864 291 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC123904.3-201ENST00000547218 814 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC093012.1-202ENST00000549403 582 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AL157394.1-201ENST00000562983 1224 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 MIR4293-201ENST00000584305 78 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC010620.1-201ENST00000601088 1102 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 KC877982.1-201ENST00000602313 470 ntBASIC3.67□□□□□ -1.82
SMC4Q9NTJ3 AC092354.1-201ENST00000606057 376 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms