Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIR200C-201ENST00000384980 68 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 MIR134-201ENST00000385258 73 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 AL354719.1-201ENST00000406535 843 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 SNORA57.3-201ENST00000411095 141 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 DDX3P2-201ENST00000446138 111 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 AC073415.1-201ENST00000449240 153 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 AL163973.1-201ENST00000484753 577 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 AC092436.1-201ENST00000506450 503 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 AC018710.1-201ENST00000506509 158 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 KLHL2P1-201ENST00000508691 521 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 AC117522.1-201ENST00000509821 380 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 RNU6-507P-201ENST00000516045 100 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 RNA5SP164-201ENST00000516533 110 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 SUMO2P20-201ENST00000520803 283 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 OR5B19P-201ENST00000531766 928 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 OR5AL2P-201ENST00000532185 920 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 AC074050.1-201ENST00000563247 211 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 FAM60BP-201ENST00000578364 658 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 AC005730.3-201ENST00000583067 366 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 AC010591.1-201ENST00000603941 649 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 MIR6868-201ENST00000611215 58 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 AC010338.1-201ENST00000621823 717 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 AL021368.2-201ENST00000606125 5352 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 TAB3P1-202ENST00000452645 1634 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 AL365440.1-201ENST00000436135 2167 ntBASIC3.76□□□□□ -1.81
VPS50Q96JG6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
VPS50Q96JG6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS50Q96JG6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 AC073343.1-201ENST00000328239 651 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 Y_RNA.70-201ENST00000362886 110 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 Y_RNA.255-201ENST00000364581 97 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 MTATP6P4-201ENST00000427725 675 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 TXNP1-201ENST00000441872 371 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 AL162395.1-201ENST00000457882 422 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 SNORD97-201ENST00000459187 142 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 AC026784.1-201ENST00000507986 352 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 AC004062.1-201ENST00000509926 645 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 RN7SKP289-201ENST00000517244 295 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 AC023632.4-201ENST00000517783 191 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 SUB1P1-201ENST00000524415 382 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 AF235103.2-201ENST00000525753 346 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS50Q96JG6 OR4H12P-201ENST00000556269 907 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 AL589994.2-201ENST00000621124 579 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 AL354798.1-201ENST00000622505 329 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 AC009033.1-201ENST00000624279 431 ntBASIC3.75□□□□□ -1.81
VPS50Q96JG6 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS50Q96JG6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS50Q96JG6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS50Q96JG6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS50Q96JG6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS50Q96JG6 Y_RNA.160-201ENST00000363677 92 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 RNU6-960P-201ENST00000364056 120 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 MIR23B-201ENST00000384832 97 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 PTMAP2-201ENST00000397627 327 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 TXNP7-201ENST00000406296 293 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 AL356776.1-201ENST00000406574 447 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 SNORA3.3-201ENST00000408712 125 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 CYCSP19-201ENST00000411715 316 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 SNRPEP10-201ENST00000420249 274 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 RAC1P6-201ENST00000423911 575 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 AC002075.2-201ENST00000425207 252 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 AL358472.1-201ENST00000431295 329 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 AL121601.2-201ENST00000438019 707 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 RPS29P7-201ENST00000439662 171 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 AL118520.1-201ENST00000450770 291 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 RPS24P6-201ENST00000452670 400 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms