Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 OR1S2-201ENST00000302592 978 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 RNU6-600P-201ENST00000362524 99 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 Y_RNA.296-201ENST00000364930 108 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 RPS3AP24-201ENST00000407896 734 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 SNORA11.2-201ENST00000408318 127 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 RPS15AP12-201ENST00000419498 388 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 MTCO1P39-201ENST00000426148 480 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC137499.1-201ENST00000427602 88 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 MTCO2P11-201ENST00000431069 680 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC119618.1-201ENST00000434191 222 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC005094.1-201ENST00000440420 368 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AL121871.1-201ENST00000443413 436 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC126182.1-201ENST00000478134 357 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 HMGN1P28-201ENST00000521340 364 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC087883.1-201ENST00000551882 391 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 ZNF519P2-201ENST00000557032 169 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 SNORD84-203ENST00000584275 78 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC012493.2-201ENST00000595083 291 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC092794.1-201ENST00000612734 582 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 U4.5-201ENST00000617137 123 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC124864.2-201ENST00000624736 186 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 AC007256.1-201ENST00000392253 2765 ntBASIC3.73□□□□□ -1.81
VPS52Q8N1B4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS52Q8N1B4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 RNU6-511P-201ENST00000363496 107 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 RNU6-169P-201ENST00000365336 107 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 SNORA20.2-201ENST00000383922 131 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 RN7SKP53-201ENST00000411337 315 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 PPP1R11P2-201ENST00000423543 382 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AC007283.2-201ENST00000424739 197 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 DUTP6-201ENST00000425573 462 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 TXNP1-201ENST00000441872 371 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AC016696.1-201ENST00000446949 318 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AL162389.1-201ENST00000449233 177 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AC010285.1-201ENST00000470580 392 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AC023598.1-201ENST00000472521 361 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AC100870.1-201ENST00000522035 505 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 OR5G4P-201ENST00000525251 760 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AC136619.2-201ENST00000563361 631 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 MIR4293-201ENST00000584305 78 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AL022099.1-201ENST00000604551 712 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AC008277.2-201ENST00000605196 797 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AC007684.1-201ENST00000609671 477 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AL161734.1-201ENST00000609720 557 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 TUG1_2.1-201ENST00000614234 87 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS52Q8N1B4 AC009812.4-201ENST00000569134 1805 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 DDX10P1-201ENST00000448545 1933 ntBASIC3.72□□□□□ -1.81
VPS52Q8N1B4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
VPS52Q8N1B4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.71□□□□□ -1.81
VPS52Q8N1B4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
VPS52Q8N1B4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.71□□□□□ -1.81
VPS52Q8N1B4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
VPS52Q8N1B4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
VPS52Q8N1B4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS52Q8N1B4 OR4G2P-201ENST00000328113 903 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 RPL7P26-201ENST00000333817 754 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 RNU6-181P-201ENST00000363225 107 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 RNA5SP42-201ENST00000364278 115 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 U3.11-201ENST00000364476 212 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 RNU6-282P-201ENST00000365357 103 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms