Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.17□□□□□ -1.9
HNF4AP41235 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.17□□□□□ -1.9
HNF4AP41235 Z96811.1-201ENST00000445880 108 ntBASIC3.17□□□□□ -1.9
HNF4AP41235 AL162389.1-201ENST00000449233 177 ntBASIC3.17□□□□□ -1.9
HNF4AP41235 RPL7P49-201ENST00000471402 708 ntBASIC3.17□□□□□ -1.9
HNF4AP41235 RPS20P22-201ENST00000473700 357 ntBASIC3.17□□□□□ -1.9
HNF4AP41235 AP000797.1-201ENST00000478870 387 ntBASIC3.17□□□□□ -1.9
HNF4AP41235 RPS27P26-201ENST00000494583 239 ntBASIC3.17□□□□□ -1.9
HNF4AP41235 AC025881.1-201ENST00000518851 512 ntBASIC3.17□□□□□ -1.9
HNF4AP41235 AC104027.1-201ENST00000521887 300 ntBASIC3.17□□□□□ -1.9
HNF4AP41235 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.17□□□□□ -1.9
HNF4AP41235 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.17□□□□□ -1.9
HNF4AP41235 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.17□□□□□ -1.9
HNF4AP41235 AC005951.2-201ENST00000576282 495 ntBASIC3.17□□□□□ -1.9
HNF4AP41235 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.17□□□□□ -1.9
HNF4AP41235 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.17□□□□□ -1.9
HNF4AP41235 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.17□□□□□ -1.9
HNF4AP41235 AC068790.6-201ENST00000602558 258 ntBASIC3.17□□□□□ -1.9
HNF4AP41235 BCRP9-201ENST00000605312 388 ntBASIC3.17□□□□□ -1.9
HNF4AP41235 AL139286.2-201ENST00000606838 396 ntBASIC3.17□□□□□ -1.9
HNF4AP41235 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HNF4AP41235 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.17□□□□□ -1.9
HNF4AP41235 AL157817.1-201ENST00000614264 790 ntBASIC3.17□□□□□ -1.9
HNF4AP41235 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.17□□□□□ -1.9
HNF4AP41235 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.17□□□□□ -1.9
HNF4AP41235 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.17□□□□□ -1.9
HNF4AP41235 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
HNF4AP41235 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HNF4AP41235 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.16□□□□□ -1.9
HNF4AP41235 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HNF4AP41235 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.16□□□□□ -1.9
HNF4AP41235 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HNF4AP41235 RNU1-70P-201ENST00000362618 164 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 RNU5F-7P-201ENST00000363696 115 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 RNU1-33P-201ENST00000364249 162 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 RNU4-91P-201ENST00000364778 135 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 RNU6-1119P-201ENST00000384349 108 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 RPL5P18-201ENST00000406671 891 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 Y_RNA.599-201ENST00000410489 109 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 RNU6-193P-201ENST00000410977 107 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.16□□□□□ -1.9
HNF4AP41235 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.16□□□□□ -1.9
HNF4AP41235 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.16□□□□□ -1.9
HNF4AP41235 AC063979.1-201ENST00000415539 377 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AL031779.1-201ENST00000415663 330 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 MTCO1P21-201ENST00000416634 589 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC092047.1-201ENST00000424997 240 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.16□□□□□ -1.9
HNF4AP41235 AC005019.1-201ENST00000436455 431 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AL049734.2-201ENST00000441066 616 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 PIGFP3-201ENST00000441918 722 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.16□□□□□ -1.9
HNF4AP41235 AP1S2P1-201ENST00000457344 379 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.16□□□□□ -1.9
HNF4AP41235 AC087588.1-201ENST00000462203 316 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC233702.1-201ENST00000482905 502 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC034222.1-201ENST00000494052 532 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.16□□□□□ -1.9
HNF4AP41235 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.16□□□□□ -1.9
HNF4AP41235 AF131216.2-201ENST00000512316 564 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC034159.1-201ENST00000513885 583 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.16□□□□□ -1.9
HNF4AP41235 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.16□□□□□ -1.9
HNF4AP41235 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.16□□□□□ -1.9
HNF4AP41235 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
HNF4AP41235 MIR4307-201ENST00000582802 84 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.16□□□□□ -1.9
HNF4AP41235 AC083760.1-201ENST00000589621 670 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.16□□□□□ -1.9
HNF4AP41235 AC025165.5-201ENST00000602802 578 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC078795.2-201ENST00000602835 1252 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC024220.1-201ENST00000603675 484 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC073657.2-201ENST00000605661 303 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC069200.1-201ENST00000609511 323 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC104073.3-201ENST00000610942 955 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC084757.4-201ENST00000616350 526 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC099842.1-201ENST00000619919 596 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.16□□□□□ -1.9
HNF4AP41235 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.16□□□□□ -1.9
HNF4AP41235 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.16□□□□□ -1.9
HNF4AP41235 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HNF4AP41235 AC009902.3-201ENST00000606235 2172 ntBASIC3.15□□□□□ -1.9
HNF4AP41235 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
HNF4AP41235 FGF7P2-201ENST00000332473 296 ntBASIC3.15□□□□□ -1.91
HNF4AP41235 U3.11-201ENST00000364476 212 ntBASIC3.15□□□□□ -1.91
HNF4AP41235 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HNF4AP41235 RNU6-769P-201ENST00000384407 104 ntBASIC3.15□□□□□ -1.91
HNF4AP41235 U8.14-201ENST00000390843 143 ntBASIC3.15□□□□□ -1.91
HNF4AP41235 TXNP7-201ENST00000406296 293 ntBASIC3.15□□□□□ -1.91
HNF4AP41235 AL031121.1-201ENST00000406553 254 ntBASIC3.15□□□□□ -1.91
HNF4AP41235 RN7SKP266-201ENST00000410232 287 ntBASIC3.15□□□□□ -1.91
HNF4AP41235 RNU2-33P-201ENST00000410344 192 ntBASIC3.15□□□□□ -1.91
HNF4AP41235 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
HNF4AP41235 AL663109.1-201ENST00000411498 844 ntBASIC3.15□□□□□ -1.91
HNF4AP41235 HMGN1P24-201ENST00000412282 298 ntBASIC3.15□□□□□ -1.91
HNF4AP41235 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.15□□□□□ -1.91
HNF4AP41235 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.15□□□□□ -1.91
HNF4AP41235 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.15□□□□□ -1.91
HNF4AP41235 OR2B8P-201ENST00000432841 938 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms