Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 RNU1-100P-201ENST00000365255 165 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 RNU6-140P-201ENST00000384566 108 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AL590084.2-201ENST00000401481 382 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 RNA5SP21-201ENST00000410917 96 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AL513331.1-201ENST00000411908 397 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AL451054.2-201ENST00000420896 202 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 NUP35P1-201ENST00000422734 947 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 MTCO3P30-201ENST00000426425 670 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AC063976.3-201ENST00000426849 329 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AC112220.1-201ENST00000434628 355 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 Z80107.1-201ENST00000436830 412 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AL109933.2-201ENST00000452651 260 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 SNORD109B-201ENST00000458961 67 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 SNORD109A-201ENST00000459128 67 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 MEMO1P3-201ENST00000459811 302 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 MRPS17P3-201ENST00000465453 385 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 SRIP1-201ENST00000489235 288 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AC079395.1-201ENST00000510981 262 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AC034159.1-201ENST00000513885 583 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AC022634.1-201ENST00000520765 532 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 HMGN1P28-201ENST00000521340 364 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 OR4R1P-201ENST00000529879 463 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 BNIP3P27-201ENST00000599991 412 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AL356280.1-201ENST00000603614 379 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AC136601.2-201ENST00000604356 474 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AL049779.4-201ENST00000604500 156 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 FTX_3.1-201ENST00000610451 147 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 AL359693.1-201ENST00000614959 2407 ntBASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 SNORA38-201ENST00000363946 132 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 RNU6-744P-201ENST00000365557 107 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 RNU6-1316P-201ENST00000384242 108 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 RNU2-52P-201ENST00000410680 190 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 MTCYBP38-201ENST00000417160 1123 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 SNRPEP7-201ENST00000438350 220 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 MTCO1P53-201ENST00000441633 699 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AC107626.1-201ENST00000471084 183 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AC007954.1-201ENST00000554198 494 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 MIR3908-201ENST00000579798 126 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 DUXAP3-201ENST00000603616 594 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AC005014.3-201ENST00000605985 190 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AC018645.2-201ENST00000609151 472 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AC131235.4-201ENST00000609288 620 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AC010133.1-201ENST00000615809 842 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AC109809.1-201ENST00000619665 545 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 AC004808.1-201ENST00000627671 721 ntBASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
KLHL28Q9NXS3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 RNU6-1176P-201ENST00000390955 107 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 ANAPC10P1-201ENST00000395991 556 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 RPS4XP8-201ENST00000402039 771 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 ERHP2-201ENST00000402323 299 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 TXNP7-201ENST00000406296 293 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AL355143.1-201ENST00000407101 841 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AC019097.1-201ENST00000424783 735 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 ARL5AP4-201ENST00000430731 512 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 RPL35AP22-201ENST00000436855 335 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms