Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 RNA5SP139-201ENST00000364340 117 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 SNORA23-201ENST00000365128 182 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 RNU6-741P-201ENST00000383889 107 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 RNA5SP252-201ENST00000391131 119 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AL031121.1-201ENST00000406553 254 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AC096664.2-201ENST00000411843 406 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 RPL23AP39-201ENST00000415533 405 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AC092573.2-201ENST00000434546 243 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AL133217.1-201ENST00000450980 425 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 UQCRHP3-201ENST00000451503 251 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 ART2BP-201ENST00000453501 499 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AC010099.1-201ENST00000455434 375 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 RPS20P22-201ENST00000473700 357 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AC068587.2-201ENST00000478386 781 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AC116347.2-201ENST00000514912 523 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AL133393.1-201ENST00000603277 287 ntBASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 FAM35CP-201ENST00000554755 2470 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AC006378.2-201ENST00000623178 2476 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 MTND5P33-201ENST00000571250 1450 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 OR4G2P-202ENST00000641004 1759 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 CCT4P2-201ENST00000233836 1548 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 RNY4P24-201ENST00000362735 96 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 Y_RNA.169-201ENST00000363745 96 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 Y_RNA.560-201ENST00000384689 102 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 RPL21P3-201ENST00000395517 478 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AL138885.1-201ENST00000405921 675 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 CCNG1P1-201ENST00000406783 885 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 RNA5SP274-201ENST00000410484 108 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 Z85995.1-201ENST00000415547 335 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 MTND4P20-201ENST00000424125 869 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AC091390.3-201ENST00000426478 338 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 CBWD4P-201ENST00000445695 655 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AC146507.2-201ENST00000460608 476 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 RN7SL75P-201ENST00000461926 281 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AC135721.1-201ENST00000497954 479 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 RNU6-1256P-201ENST00000516539 103 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 RNU6-759P-201ENST00000516740 103 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 PSMA2P1-201ENST00000526365 646 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 ATP5F1P5-201ENST00000526403 760 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 DUXAP5-201ENST00000529668 529 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AP000867.2-201ENST00000532468 320 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 MIR4307-201ENST00000582802 84 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AC090616.2-202ENST00000584248 222 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 MTCYBP22-201ENST00000603788 447 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AL161729.4-201ENST00000604650 476 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AL360219.1-201ENST00000610230 366 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AC004223.4-201ENST00000612426 332 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 TUG1_2.1-201ENST00000614234 87 ntBASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.85□□□□□ -1.95
ATG4BQ9Y4P1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 GNG5P1-201ENST00000255500 204 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 RNU5F-7P-201ENST00000363696 115 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 RNU1-39P-201ENST00000383897 165 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 RNU6-1035P-201ENST00000384477 107 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 RPL17P50-201ENST00000396131 546 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 MIR887-201ENST00000401258 79 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AL109755.1-201ENST00000401791 649 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 RPL5P18-201ENST00000406671 891 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 UBE2FP1-201ENST00000416536 447 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 VPS26BP1-201ENST00000417155 755 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AC092047.1-201ENST00000424997 240 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms