Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXC4P09017 TIMM9P2-201ENST00000419324 266 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXC4P09017 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXC4P09017 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXC4P09017 AC079780.1-201ENST00000428259 207 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 RPS25P9-201ENST00000435591 252 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 MTCO2P25-201ENST00000447065 681 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXC4P09017 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXC4P09017 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXC4P09017 KLRA1P-201ENST00000503499 986 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXC4P09017 LTV1P1-201ENST00000510683 1237 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AC109445.1-201ENST00000512356 383 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 MTND5P13-201ENST00000513046 1079 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 SNORA31.1-201ENST00000515993 133 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 SNORA31.5-201ENST00000516190 133 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 RNY4P37-201ENST00000516225 96 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 RNA5SP282-201ENST00000516355 108 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AP001804.3-201ENST00000525146 880 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AC007115.1-201ENST00000546853 234 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXC4P09017 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HOXC4P09017 AP005205.1-201ENST00000563503 508 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AC002400.1-201ENST00000569310 726 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AC138915.2-201ENST00000569776 97 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AC103987.3-201ENST00000582071 292 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.66□□□□□ -1.98
HOXC4P09017 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXC4P09017 NBR2-204ENST00000587322 63 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AC083760.1-201ENST00000589621 670 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXC4P09017 VN1R82P-201ENST00000601481 356 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AC012669.1-201ENST00000603209 283 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HOXC4P09017 AC004223.4-201ENST00000612426 332 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AC092140.2-201ENST00000618027 521 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HOXC4P09017 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXC4P09017 CUL1P1-201ENST00000509510 2425 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AC005539.1-201ENST00000443768 1479 ntBASIC2.65□□□□□ -1.98
HOXC4P09017 AL365361.1-201ENST00000566942 3481 ntBASIC2.65□□□□□ -1.98
HOXC4P09017 AL445523.1-201ENST00000451184 1362 ntBASIC2.65□□□□□ -1.98
HOXC4P09017 RNU6-173P-201ENST00000364215 104 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 RNU6-621P-201ENST00000364752 109 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 Y_RNA.311-201ENST00000365068 96 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
HOXC4P09017 SNORD51-201ENST00000384320 80 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 RPS15AP38-201ENST00000413110 372 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXC4P09017 AC092447.6-201ENST00000414578 210 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.65□□□□□ -1.99
HOXC4P09017 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXC4P09017 AC019178.2-201ENST00000423595 505 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AL022400.1-201ENST00000423946 935 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 DLGAP5P1-201ENST00000430307 464 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 MTND1P20-201ENST00000430341 950 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AC010153.1-201ENST00000432862 727 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.65□□□□□ -1.99
HOXC4P09017 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXC4P09017 MTND1P29-201ENST00000448112 647 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 OR6C5P-201ENST00000452388 923 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 PNPLA4P1-201ENST00000458328 305 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 RPL31P3-201ENST00000458430 332 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 MTND1P16-201ENST00000465177 898 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 MTND4LP3-201ENST00000468320 276 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXC4P09017 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.65□□□□□ -1.99
HOXC4P09017 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.65□□□□□ -1.99
HOXC4P09017 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.65□□□□□ -1.99
HOXC4P09017 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXC4P09017 AC006390.1-201ENST00000508068 283 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HOXC4P09017 AC005178.1-201ENST00000508392 440 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.65□□□□□ -1.99
HOXC4P09017 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.65□□□□□ -1.99
HOXC4P09017 Y_RNA.655-201ENST00000515919 96 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 RNU6-1095P-201ENST00000516148 108 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AC027309.2-201ENST00000520566 192 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AP000857.1-201ENST00000532151 543 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.65□□□□□ -1.99
HOXC4P09017 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.65□□□□□ -1.99
HOXC4P09017 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.65□□□□□ -1.99
HOXC4P09017 AC012435.1-202ENST00000568772 240 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXC4P09017 ISCA1P3-201ENST00000577104 373 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 OR4K7P-201ENST00000580232 945 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.65□□□□□ -1.99
HOXC4P09017 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.65□□□□□ -1.99
HOXC4P09017 WISP1-OT1-201ENST00000602893 642 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AL592221.1-201ENST00000605266 382 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AC009570.1-201ENST00000609599 745 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AC106028.5-201ENST00000610332 395 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 AC011939.3-201ENST00000613686 466 ntBASIC2.65□□□□□ -1.99
HOXC4P09017 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms