Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 TIMM9P2-201ENST00000419324 266 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 MTCO2P5-201ENST00000422621 426 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AL354692.1-201ENST00000423044 315 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 BX119904.4-201ENST00000424402 301 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 ATP5F1P1-201ENST00000433775 569 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 ARPC3P1-201ENST00000437218 533 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 EEF1A1P39-201ENST00000440791 250 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 MTCYBP3-201ENST00000445588 1137 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AL592447.1-201ENST00000447592 540 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 snoU109.3-201ENST00000459477 145 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 RPL31P50-201ENST00000471002 296 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AC080014.1-201ENST00000496877 1201 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AC112673.1-201ENST00000513168 575 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 RNU6-150P-201ENST00000516237 95 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 RNA5SP367-201ENST00000516557 118 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 GLYCAM1-201ENST00000546596 285 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AC091057.3-201ENST00000602684 733 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 DUXAP10-204ENST00000612052 616 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AL596245.1-201ENST00000618994 362 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 UCA1.1-201ENST00000620952 75 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AL137790.1-201ENST00000634283 177 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AC116618.1-201ENST00000634617 774 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 AC135776.4-201ENST00000624300 1904 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 MIRLET7G-201ENST00000362280 84 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 RNU6-461P-201ENST00000364195 107 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 MIR9-1-201ENST00000385198 89 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 MIR325-201ENST00000385260 98 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 RNU6-1242P-201ENST00000391052 103 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 RPL23AP29-201ENST00000397284 453 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 ERHP2-201ENST00000402323 299 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 HMGB1P17-201ENST00000403495 628 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AL136310.1-201ENST00000404926 654 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 RNU6-193P-201ENST00000410977 107 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 OR4K11P-201ENST00000431829 904 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 TAAR7P-201ENST00000436141 242 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AC007327.1-201ENST00000447461 264 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 ZNF886P-201ENST00000450781 723 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AC092155.2-201ENST00000454675 477 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AC097493.1-201ENST00000463958 372 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 RPL30P9-201ENST00000465586 330 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AC090615.1-201ENST00000577519 154 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AC006270.3-201ENST00000605967 1036 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AC245517.5-201ENST00000611529 162 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AC107075.1-201ENST00000613695 314 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AC034102.8-201ENST00000615146 484 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AL109620.1-201ENST00000618738 1197 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 FO624990.1-201ENST00000636373 85 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 OR5H6-203ENST00000642105 978 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AL356473.1-201ENST00000406203 1408 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 AL355596.1-201ENST00000565399 3996 ntBASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
EXOSC4Q9NPD3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 Y_RNA.192-201ENST00000363977 102 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 RNA5SP387-201ENST00000364226 106 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 Y_RNA.333-201ENST00000365274 102 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 MIR128-1-201ENST00000384921 82 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AL356057.3-201ENST00000402607 340 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AC006946.1-201ENST00000429106 328 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 SUMO1P4-201ENST00000429430 302 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 MTND4P6-201ENST00000438297 472 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AC105272.1-201ENST00000438604 198 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AC002381.1-201ENST00000447049 280 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms