Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
LMX1AQ8TE12 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LMX1AQ8TE12 FRG1BP-201ENST00000278882 761 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 RNU6-173P-201ENST00000364215 104 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.07□□□□□ -2.08
LMX1AQ8TE12 MIR493-201ENST00000385254 89 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 AL356057.2-201ENST00000403318 432 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.07□□□□□ -2.08
LMX1AQ8TE12 AC092447.6-201ENST00000414578 210 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 RAC1P8-201ENST00000427086 527 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 FO393414.1-201ENST00000428697 1184 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 EZH2P1-201ENST00000431167 291 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 AC017099.1-201ENST00000448261 1028 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.07□□□□□ -2.08
LMX1AQ8TE12 AC234775.1-201ENST00000454247 670 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.07□□□□□ -2.08
LMX1AQ8TE12 AC106872.3-201ENST00000495104 446 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 MTCO2P9-201ENST00000503214 694 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 RN7SKP40-201ENST00000517211 242 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.07□□□□□ -2.08
LMX1AQ8TE12 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.07□□□□□ -2.08
LMX1AQ8TE12 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.07□□□□□ -2.08
LMX1AQ8TE12 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.07□□□□□ -2.08
LMX1AQ8TE12 GAS5-AS1-201ENST00000602767 694 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 AC024560.3-201ENST00000608482 349 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 AP005229.2-201ENST00000609980 697 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 AL356094.1-201ENST00000624663 1212 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LMX1AQ8TE12 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LMX1AQ8TE12 ZNF72P-201ENST00000425869 1908 ntBASIC2.07□□□□□ -2.08
LMX1AQ8TE12 AL356292.1-201ENST00000283110 373 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.06□□□□□ -2.08
LMX1AQ8TE12 SNORD82-201ENST00000365530 70 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 RNU6-468P-201ENST00000384003 109 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 SNORA48.3-201ENST00000391081 134 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.06□□□□□ -2.08
LMX1AQ8TE12 SUMO1P4-201ENST00000429430 302 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 MTND4LP10-201ENST00000435146 291 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.06□□□□□ -2.08
LMX1AQ8TE12 NDUFB4P6-201ENST00000436819 366 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AC009961.3-201ENST00000449832 765 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 NDUFA5P7-201ENST00000452914 242 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AC092798.1-201ENST00000458542 409 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AC093767.1-201ENST00000504523 156 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 CBX3P3-201ENST00000508108 532 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 SNORA70.16-201ENST00000516390 95 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.06□□□□□ -2.08
LMX1AQ8TE12 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.06□□□□□ -2.08
LMX1AQ8TE12 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AP000889.2-201ENST00000532684 490 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.06□□□□□ -2.08
LMX1AQ8TE12 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
LMX1AQ8TE12 MIR3609-201ENST00000582661 80 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AC008739.2-201ENST00000597006 317 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AC012443.1-201ENST00000605605 231 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AL161734.1-201ENST00000609720 557 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AC107308.1-201ENST00000615897 301 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.06□□□□□ -2.08
LMX1AQ8TE12 AC091925.2-201ENST00000625059 256 ntBASIC2.06□□□□□ -2.08
LMX1AQ8TE12 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 TMSB4XP8-201ENST00000402089 135 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC096533.1-201ENST00000411645 353 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 TMSB4XP6-201ENST00000415187 135 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AL356320.2-201ENST00000417263 507 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 TMSB4XP1-201ENST00000424567 135 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 MTCO2P1-201ENST00000424648 477 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AL445646.1-201ENST00000431784 216 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC129850.1-201ENST00000436203 508 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC010099.1-201ENST00000455434 375 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AL109741.2-201ENST00000455561 343 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC010625.1-201ENST00000511296 403 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 RNU6-27P-201ENST00000516146 107 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 MTCO1P47-201ENST00000523889 1271 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 HMGB1P14-201ENST00000557424 591 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 TPMTP1-201ENST00000592307 737 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC025811.1-201ENST00000604312 472 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AL049779.4-201ENST00000604500 156 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AP005137.2-201ENST00000609238 400 ntBASIC2.05□□□□□ -2.08
LMX1AQ8TE12 AC103710.2-201ENST00000609912 942 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms