Protein–RNA interactions for Protein: T1NXB5

Vstm4, V-set and transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vstm4T1NXB5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Mir1199-201ENSMUST00000117015 119 ntBASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Timm23-208ENSMUST00000226683 750 ntBASIC17.67■□□□□ 0.42
Vstm4T1NXB5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vstm4T1NXB5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.66■□□□□ 0.42
Vstm4T1NXB5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vstm4T1NXB5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Asic1-205ENSMUST00000228185 1818 ntBASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vstm4T1NXB5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Vstm4T1NXB5 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Vstm4T1NXB5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vstm4T1NXB5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vstm4T1NXB5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Vstm4T1NXB5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vstm4T1NXB5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Vstm4T1NXB5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vstm4T1NXB5 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms