Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Gm27275-201ENSMUST00000184318 272 ntBASIC12.52□□□□□ -0.41
PdfS4R2K0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
PdfS4R2K0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.52□□□□□ -0.41
PdfS4R2K0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
PdfS4R2K0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PdfS4R2K0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.51□□□□□ -0.41
PdfS4R2K0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.51□□□□□ -0.41
PdfS4R2K0 Gm13401-201ENSMUST00000117074 291 ntBASIC12.51□□□□□ -0.41
PdfS4R2K0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PdfS4R2K0 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.51□□□□□ -0.41
PdfS4R2K0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.51□□□□□ -0.41
PdfS4R2K0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.51□□□□□ -0.41
PdfS4R2K0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PdfS4R2K0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
PdfS4R2K0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
PdfS4R2K0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.5□□□□□ -0.41
PdfS4R2K0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.5□□□□□ -0.41
PdfS4R2K0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Zfp783-201ENSMUST00000095946 670 ntBASIC12.5□□□□□ -0.41
PdfS4R2K0 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.5□□□□□ -0.41
PdfS4R2K0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
PdfS4R2K0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.5□□□□□ -0.41
PdfS4R2K0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdfS4R2K0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
PdfS4R2K0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
PdfS4R2K0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.49□□□□□ -0.41
PdfS4R2K0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.49□□□□□ -0.41
PdfS4R2K0 Gm11927-201ENSMUST00000118472 759 ntBASIC12.49□□□□□ -0.41
PdfS4R2K0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.49□□□□□ -0.41
PdfS4R2K0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.49□□□□□ -0.41
PdfS4R2K0 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.49□□□□□ -0.41
PdfS4R2K0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdfS4R2K0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms