Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Gm10231-201ENSMUST00000181584 441 ntBASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Gm10175-202ENSMUST00000208752 441 ntBASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb2S4R1M3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb2S4R1M3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb2S4R1M3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb2S4R1M3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
H2afb2S4R1M3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms