Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cr1Q9Z0D9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cx3cr1Q9Z0D9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cr1Q9Z0D9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cr1Q9Z0D9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cx3cr1Q9Z0D9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cr1Q9Z0D9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cr1Q9Z0D9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cr1Q9Z0D9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cr1Q9Z0D9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Cx3cr1Q9Z0D9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cr1Q9Z0D9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cx3cr1Q9Z0D9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.83□□□□□ -0.19
Cx3cr1Q9Z0D9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cx3cr1Q9Z0D9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cx3cr1Q9Z0D9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cx3cr1Q9Z0D9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cx3cr1Q9Z0D9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Gm43183-201ENSMUST00000200632 547 ntBASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cx3cr1Q9Z0D9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.82□□□□□ -0.2
Cx3cr1Q9Z0D9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Gm27275-201ENSMUST00000184318 272 ntBASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Gm8495-201ENSMUST00000188740 694 ntBASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Il3ra-202ENSMUST00000223589 738 ntBASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms