Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Gm2651-201ENSMUST00000203560 838 ntBASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Gm6296-201ENSMUST00000222599 943 ntBASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn8aQ9WTU3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Gm13036-201ENSMUST00000117799 748 ntBASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scn8aQ9WTU3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn8aQ9WTU3 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.27■□□□□ 0.2
Scn8aQ9WTU3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Scn8aQ9WTU3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn8aQ9WTU3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn8aQ9WTU3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Scn8aQ9WTU3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn8aQ9WTU3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn8aQ9WTU3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn8aQ9WTU3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn8aQ9WTU3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Scn8aQ9WTU3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn8aQ9WTU3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn8aQ9WTU3 Gm18733-201ENSMUST00000173950 856 ntBASIC16.27■□□□□ 0.19
Scn8aQ9WTU3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Scn8aQ9WTU3 Gm10060-201ENSMUST00000212002 111 ntBASIC16.27■□□□□ 0.19
Scn8aQ9WTU3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn8aQ9WTU3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn8aQ9WTU3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn8aQ9WTU3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Scn8aQ9WTU3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn8aQ9WTU3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms