Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn2Q9R0A1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn2Q9R0A1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Clcn2Q9R0A1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Clcn2Q9R0A1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Clcn2Q9R0A1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Gm13474-201ENSMUST00000122466 815 ntBASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn2Q9R0A1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn2Q9R0A1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.62■□□□□ 0.25
Clcn2Q9R0A1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms