Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Mir1895-201ENSMUST00000122615 79 ntBASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.03□□□□□ -0.32
Crlf1Q9JM58 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Crlf1Q9JM58 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Crlf1Q9JM58 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Crlf1Q9JM58 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Crlf1Q9JM58 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Crlf1Q9JM58 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Crlf1Q9JM58 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Crlf1Q9JM58 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Crlf1Q9JM58 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Crlf1Q9JM58 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Crlf1Q9JM58 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Gm27494-201ENSMUST00000184735 189 ntBASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Mir7023-201ENSMUST00000185093 64 ntBASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crlf1Q9JM58 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Crlf1Q9JM58 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 Dmtn-210ENSMUST00000228824 2377 ntBASIC13□□□□□ -0.33
Crlf1Q9JM58 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13□□□□□ -0.33
Crlf1Q9JM58 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13□□□□□ -0.33
Crlf1Q9JM58 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13□□□□□ -0.33
Crlf1Q9JM58 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms