Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Gm13474-201ENSMUST00000122466 815 ntBASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Sec61a2Q9JLR1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Gm16061-201ENSMUST00000122167 857 ntBASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Gm7977-201ENSMUST00000193787 748 ntBASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a2Q9JLR1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Gm18032-201ENSMUST00000222541 538 ntBASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a2Q9JLR1 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Gm10566-201ENSMUST00000086739 996 ntBASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sec61a2Q9JLR1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a2Q9JLR1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a2Q9JLR1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a2Q9JLR1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a2Q9JLR1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a2Q9JLR1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a2Q9JLR1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a2Q9JLR1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a2Q9JLR1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a2Q9JLR1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a2Q9JLR1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a2Q9JLR1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sec61a2Q9JLR1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms